Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Ddx47Q9CWX9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx47Q9CWX9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx47Q9CWX9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Gm18622-201ENSMUST00000219361 595 ntBASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx47Q9CWX9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx47Q9CWX9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Gm8344-201ENSMUST00000119813 856 ntBASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx47Q9CWX9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx47Q9CWX9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx47Q9CWX9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Ddx47Q9CWX9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx47Q9CWX9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms