Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Gm8396-201ENSMUST00000057361 823 ntBASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.04□□□□□ -0.16
Otud1Q9CUB6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.04□□□□□ -0.16
Otud1Q9CUB6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otud1Q9CUB6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Otud1Q9CUB6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.02□□□□□ -0.16
Otud1Q9CUB6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Gm25925-201ENSMUST00000158314 306 ntBASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 CT009738.1-201ENSMUST00000219031 809 ntBASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Otud1Q9CUB6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms