Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Gm27892-201ENSMUST00000185017 106 ntBASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldnd1Q9CQX5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldnd1Q9CQX5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Gm13464-201ENSMUST00000119418 935 ntBASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Mir125a-201ENSMUST00000083545 68 ntBASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldnd1Q9CQX5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.09■□□□□ 0.01
Cldnd1Q9CQX5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms