Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Carlr-201ENSMUST00000181515 2574 ntBASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Gm7506-201ENSMUST00000207758 815 ntBASIC14.04□□□□□ -0.16
Ska1Q9CPV1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ska1Q9CPV1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ska1Q9CPV1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ska1Q9CPV1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ska1Q9CPV1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms