Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Gm8655-201ENSMUST00000221159 852 ntBASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Gm15358-201ENSMUST00000119249 520 ntBASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Gm10499-201ENSMUST00000174094 934 ntBASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Gm27357-201ENSMUST00000183754 135 ntBASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim8Q99PJ2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim8Q99PJ2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms