Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col25a1Q99MQ5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Gm45784-201ENSMUST00000188360 142 ntBASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col25a1Q99MQ5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.05
Col25a1Q99MQ5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col25a1Q99MQ5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.33■□□□□ 0.05
Col25a1Q99MQ5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col25a1Q99MQ5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col25a1Q99MQ5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col25a1Q99MQ5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Dupd1-202ENSMUST00000224735 548 ntBASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Prob1-201ENSMUST00000097619 3021 ntBASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col25a1Q99MQ5 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Grk6-207ENSMUST00000225925 2769 ntBASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Gm9522-201ENSMUST00000182394 926 ntBASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col25a1Q99MQ5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms