Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkd1Q99MH6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.02□□□□□ -0.16
Nkd1Q99MH6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Gm4535-201ENSMUST00000182274 558 ntBASIC14.02□□□□□ -0.17
Nkd1Q99MH6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Gm10355-201ENSMUST00000097146 517 ntBASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkd1Q99MH6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkd1Q99MH6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14□□□□□ -0.17
Nkd1Q99MH6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkd1Q99MH6 Gm45504-201ENSMUST00000211407 2107 ntBASIC14□□□□□ -0.17
Nkd1Q99MH6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14□□□□□ -0.17
Nkd1Q99MH6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkd1Q99MH6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14□□□□□ -0.17
Nkd1Q99MH6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkd1Q99MH6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms