Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Mir8098-201ENSMUST00000184011 137 ntBASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Gm10060-201ENSMUST00000212002 111 ntBASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 AV026068-213ENSMUST00000223675 1171 ntBASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.36□□□□□ -0.11
Cstf3Q99LI7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf3Q99LI7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Gm45167-201ENSMUST00000208007 322 ntBASIC14.34□□□□□ -0.11
Cstf3Q99LI7 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.34□□□□□ -0.11
Cstf3Q99LI7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms