Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc1bQ920F6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.15■□□□□ 0.34
Smc1bQ920F6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.15■□□□□ 0.34
Smc1bQ920F6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smc1bQ920F6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc1bQ920F6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smc1bQ920F6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smc1bQ920F6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.14■□□□□ 0.33
Smc1bQ920F6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.14■□□□□ 0.33
Smc1bQ920F6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.14■□□□□ 0.33
Smc1bQ920F6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc1bQ920F6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Gm25287-201ENSMUST00000103846 110 ntBASIC17.13■□□□□ 0.33
Smc1bQ920F6 Gm22918-201ENSMUST00000103855 110 ntBASIC17.13■□□□□ 0.33
Smc1bQ920F6 Gm13823-201ENSMUST00000119930 345 ntBASIC17.13■□□□□ 0.33
Smc1bQ920F6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.13■□□□□ 0.33
Smc1bQ920F6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.13■□□□□ 0.33
Smc1bQ920F6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.13■□□□□ 0.33
Smc1bQ920F6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.13■□□□□ 0.33
Smc1bQ920F6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc1bQ920F6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms