Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Gm14701-201ENSMUST00000117156 348 ntBASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Gm11543-201ENSMUST00000120758 370 ntBASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha11Q91Y19 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Mir6990-201ENSMUST00000183724 91 ntBASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdha11Q91Y19 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
Pcdha11Q91Y19 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdha11Q91Y19 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Gm15483-201ENSMUST00000120338 456 ntBASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha11Q91Y19 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms