Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb3Q91XZ7 Carlr-201ENSMUST00000181515 2574 ntBASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb3Q91XZ7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Gm13312-201ENSMUST00000119631 718 ntBASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Gm27459-201ENSMUST00000184860 107 ntBASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb3Q91XZ7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms