Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Gm15590-201ENSMUST00000078419 552 ntBASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb8Q91XZ2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.52□□□□□ -0.08
Pcdhb8Q91XZ2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Mir5126-201ENSMUST00000175513 77 ntBASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.52□□□□□ -0.09
Pcdhb8Q91XZ2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb8Q91XZ2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Gm27628-201ENSMUST00000184911 107 ntBASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms