Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Gm16198-201ENSMUST00000118766 670 ntBASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb17Q91VD8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Gm37215-201ENSMUST00000194927 1259 ntBASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Gm43124-201ENSMUST00000201878 278 ntBASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb17Q91VD8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Gm11893-201ENSMUST00000117829 491 ntBASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Gm25025-201ENSMUST00000175018 111 ntBASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 AC118006.2-201ENSMUST00000224167 962 ntBASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb17Q91VD8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb17Q91VD8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb17Q91VD8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb17Q91VD8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb17Q91VD8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb17Q91VD8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb17Q91VD8 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb17Q91VD8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms