Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Gm11745-201ENSMUST00000121669 448 ntBASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Snrnp25Q8VIK1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Gm27494-201ENSMUST00000184735 189 ntBASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Gm2756-201ENSMUST00000195851 400 ntBASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Snrnp25Q8VIK1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Gm6973-201ENSMUST00000117080 721 ntBASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Gm13464-201ENSMUST00000119418 935 ntBASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.54■□□□□ 0.08
Snrnp25Q8VIK1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.53■□□□□ 0.08
Snrnp25Q8VIK1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms