Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh18Q8VHR0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh18Q8VHR0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Gm7284-201ENSMUST00000131667 944 ntBASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Gm33142-201ENSMUST00000193913 867 ntBASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh18Q8VHR0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh18Q8VHR0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh18Q8VHR0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh18Q8VHR0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdh18Q8VHR0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh18Q8VHR0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh18Q8VHR0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh18Q8VHR0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms