Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Gm25016-201ENSMUST00000158399 131 ntBASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Gm6659-201ENSMUST00000174752 547 ntBASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa1Q8VEE4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Matn2-206ENSMUST00000228570 2798 ntBASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa1Q8VEE4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Gm5587-201ENSMUST00000206270 674 ntBASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms