Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx39aQ8VDW0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Gm13015-201ENSMUST00000118674 204 ntBASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Ddx39aQ8VDW0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Gm27618-201ENSMUST00000183671 60 ntBASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx39aQ8VDW0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Gm27321-201ENSMUST00000185021 205 ntBASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Gm17837-201ENSMUST00000186435 985 ntBASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Gm18049-201ENSMUST00000208909 581 ntBASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx39aQ8VDW0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ddx39aQ8VDW0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ddx39aQ8VDW0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ddx39aQ8VDW0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx39aQ8VDW0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms