Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Mir8098-201ENSMUST00000184011 137 ntBASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Gm17971-201ENSMUST00000190239 806 ntBASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Gm45167-201ENSMUST00000208007 322 ntBASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 AV026068-213ENSMUST00000223675 1171 ntBASIC14.87□□□□□ -0.03
Vps39Q8R5L3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps39Q8R5L3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Gm11452-201ENSMUST00000122376 690 ntBASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Gm10819-201ENSMUST00000099988 561 ntBASIC14.86□□□□□ -0.03
Vps39Q8R5L3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps39Q8R5L3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps39Q8R5L3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms