Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtn1Q8K0T0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rtn1Q8K0T0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Rpph1-201ENSMUST00000175096 319 ntBASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtn1Q8K0T0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Gm25911-201ENSMUST00000157621 56 ntBASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtn1Q8K0T0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtn1Q8K0T0 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms