Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Celf4-206ENSMUST00000224553 1729 ntBASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfwd3Q8CIK8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Gm8000-201ENSMUST00000188378 592 ntBASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfwd3Q8CIK8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Rfwd3Q8CIK8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfwd3Q8CIK8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Rfwd3Q8CIK8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfwd3Q8CIK8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rfwd3Q8CIK8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rfwd3Q8CIK8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms