Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab11fip3Q8CHD8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Rab11fip3Q8CHD8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab11fip3Q8CHD8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Gm9726-201ENSMUST00000180321 678 ntBASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Olfr286-202ENSMUST00000205305 969 ntBASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab11fip3Q8CHD8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Gm13223-201ENSMUST00000118609 747 ntBASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Gm13823-201ENSMUST00000119930 345 ntBASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Gm17837-201ENSMUST00000186435 985 ntBASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab11fip3Q8CHD8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rab11fip3Q8CHD8 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.14■□□□□ 0.66
Rab11fip3Q8CHD8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab11fip3Q8CHD8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab11fip3Q8CHD8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 254.3 ms