Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Gm8652-201ENSMUST00000181363 964 ntBASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rp1l1Q8CGM2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Gm18054-201ENSMUST00000207539 555 ntBASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Olfr582-201ENSMUST00000098212 960 ntBASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Gm17794-201ENSMUST00000220252 955 ntBASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rp1l1Q8CGM2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Gm14723-201ENSMUST00000118686 215 ntBASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rp1l1Q8CGM2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Gm13689-201ENSMUST00000119360 685 ntBASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Gm11803-201ENSMUST00000119966 444 ntBASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Gm26464-201ENSMUST00000157094 305 ntBASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 Gm15376-201ENSMUST00000122258 783 ntBASIC15.14■□□□□ 0.01
Rp1l1Q8CGM2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms