Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.97■□□□□ 0.15
Vcpip1Q8CDG3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Gm7862-201ENSMUST00000121461 292 ntBASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Mir5131-201ENSMUST00000175426 93 ntBASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcpip1Q8CDG3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vcpip1Q8CDG3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vcpip1Q8CDG3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vcpip1Q8CDG3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vcpip1Q8CDG3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcpip1Q8CDG3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Vcpip1Q8CDG3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms