Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps53Q8CCB4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Mir1895-201ENSMUST00000122615 79 ntBASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.28■□□□□ 0.36
Vps53Q8CCB4 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.28■□□□□ 0.36
Vps53Q8CCB4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps53Q8CCB4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.28■□□□□ 0.36
Vps53Q8CCB4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC17.27■□□□□ 0.36
Vps53Q8CCB4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps53Q8CCB4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.27■□□□□ 0.35
Vps53Q8CCB4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gm18489-201ENSMUST00000172565 551 ntBASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gm8318-201ENSMUST00000182954 872 ntBASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gm27494-201ENSMUST00000184735 189 ntBASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gm9682-201ENSMUST00000197505 556 ntBASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps53Q8CCB4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Vps53Q8CCB4 Mir6956-201ENSMUST00000183598 62 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms