Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shisa4Q8CA71 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Gm25287-201ENSMUST00000103846 110 ntBASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Gm22918-201ENSMUST00000103855 110 ntBASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Shisa4Q8CA71 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Gm45098-201ENSMUST00000207179 657 ntBASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shisa4Q8CA71 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Gm11543-201ENSMUST00000120758 370 ntBASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Gm5312-201ENSMUST00000203728 547 ntBASIC17.16■□□□□ 0.34
Shisa4Q8CA71 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shisa4Q8CA71 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shisa4Q8CA71 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms