Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp20Q8C6M1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp20Q8C6M1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp20Q8C6M1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Usp20Q8C6M1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Usp20Q8C6M1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp20Q8C6M1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp20Q8C6M1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp20Q8C6M1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Gm27920-201ENSMUST00000183953 96 ntBASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Gm37444-201ENSMUST00000193605 439 ntBASIC16.41■□□□□ 0.22
Usp20Q8C6M1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.41■□□□□ 0.22
Usp20Q8C6M1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.41■□□□□ 0.22
Usp20Q8C6M1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Usp20Q8C6M1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Gm17837-201ENSMUST00000186435 985 ntBASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp20Q8C6M1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Usp20Q8C6M1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.39■□□□□ 0.21
Usp20Q8C6M1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Gm13015-201ENSMUST00000118674 204 ntBASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.39■□□□□ 0.21
Usp20Q8C6M1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms