Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.36■□□□□ 0.37
Usp44Q8C2S0 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Gm5479-201ENSMUST00000160578 435 ntBASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp44Q8C2S0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Gm27920-201ENSMUST00000183953 96 ntBASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp44Q8C2S0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp44Q8C2S0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Usp44Q8C2S0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp44Q8C2S0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.33■□□□□ 0.36
Usp44Q8C2S0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms