Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne3Q8BT60 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Gm6376-201ENSMUST00000209407 580 ntBASIC14.36□□□□□ -0.11
Cpne3Q8BT60 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne3Q8BT60 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Gm37153-201ENSMUST00000193637 231 ntBASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne3Q8BT60 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Gm15173-201ENSMUST00000122049 433 ntBASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Gm18489-201ENSMUST00000172565 551 ntBASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms