Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Gm11355-201ENSMUST00000121120 306 ntBASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Gm37055-201ENSMUST00000191866 133 ntBASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Gm45058-201ENSMUST00000205810 766 ntBASIC12.26□□□□□ -0.45
Smco3Q8BQM7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Gm21559-201ENSMUST00000220638 855 ntBASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Gm8587-201ENSMUST00000076538 843 ntBASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Grk6-207ENSMUST00000225925 2769 ntBASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Acot6-202ENSMUST00000222921 3622 ntBASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smco3Q8BQM7 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.25□□□□□ -0.45
Smco3Q8BQM7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smco3Q8BQM7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Gm13559-201ENSMUST00000120476 863 ntBASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Gm22240-201ENSMUST00000175225 82 ntBASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Gm7889-201ENSMUST00000185591 958 ntBASIC12.24□□□□□ -0.45
Smco3Q8BQM7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Smco3Q8BQM7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms