Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sfr1Q8BP27 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Gm17271-201ENSMUST00000165535 355 ntBASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Gm43767-201ENSMUST00000198933 381 ntBASIC15.12■□□□□ 0.01
Sfr1Q8BP27 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sfr1Q8BP27 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sfr1Q8BP27 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Gm17968-201ENSMUST00000194902 784 ntBASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Gm44492-201ENSMUST00000197012 141 ntBASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sfr1Q8BP27 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms