Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm12957-201ENSMUST00000117835 377 ntBASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm5279-201ENSMUST00000199575 745 ntBASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm13226-201ENSMUST00000117838 404 ntBASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm27892-201ENSMUST00000185017 106 ntBASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gm5356-201ENSMUST00000093326 615 ntBASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Gm2495-201ENSMUST00000191160 466 ntBASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col16a1Q8BLX7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Gm13392-201ENSMUST00000117708 150 ntBASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 AC153872.1-201ENSMUST00000199539 128 ntBASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col16a1Q8BLX7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC19.16■□□□□ 0.66
Col16a1Q8BLX7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC19.15■□□□□ 0.66
Col16a1Q8BLX7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms