Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 AC166349.1-201ENSMUST00000220866 695 ntBASIC20.8■□□□□ 0.92
Usp54Q8BL06 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Gm9396-201ENSMUST00000076703 567 ntBASIC20.8■□□□□ 0.92
Usp54Q8BL06 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Gm4984-201ENSMUST00000115987 360 ntBASIC20.8■□□□□ 0.92
Usp54Q8BL06 Gm12882-201ENSMUST00000121696 517 ntBASIC20.8■□□□□ 0.92
Usp54Q8BL06 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Gm15240-201ENSMUST00000118156 720 ntBASIC20.79■□□□□ 0.92
Usp54Q8BL06 Gm15957-201ENSMUST00000118893 974 ntBASIC20.79■□□□□ 0.92
Usp54Q8BL06 Gm15824-201ENSMUST00000119516 955 ntBASIC20.79■□□□□ 0.92
Usp54Q8BL06 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.79■□□□□ 0.92
Usp54Q8BL06 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.79■□□□□ 0.92
Usp54Q8BL06 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp54Q8BL06 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 BC037039-201ENSMUST00000192003 2205 ntBASIC20.78■□□□□ 0.92
Usp54Q8BL06 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Mir1894-201ENSMUST00000122802 81 ntBASIC20.78■□□□□ 0.92
Usp54Q8BL06 Mir1938-201ENSMUST00000158746 100 ntBASIC20.78■□□□□ 0.92
Usp54Q8BL06 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Gm21470-201ENSMUST00000187680 696 ntBASIC20.78■□□□□ 0.92
Usp54Q8BL06 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp54Q8BL06 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC20.77■□□□□ 0.92
Usp54Q8BL06 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Gm17795-201ENSMUST00000214505 757 ntBASIC20.77■□□□□ 0.92
Usp54Q8BL06 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp54Q8BL06 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp54Q8BL06 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp54Q8BL06 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp54Q8BL06 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Gm12390-201ENSMUST00000117897 397 ntBASIC20.76■□□□□ 0.91
Usp54Q8BL06 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Gm5425-201ENSMUST00000214125 459 ntBASIC20.76■□□□□ 0.91
Usp54Q8BL06 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.76■□□□□ 0.91
Usp54Q8BL06 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms