Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn3bQ8BHK2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Gm8344-201ENSMUST00000119813 856 ntBASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Gm22240-201ENSMUST00000175225 82 ntBASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn3bQ8BHK2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Gm13312-201ENSMUST00000119631 718 ntBASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3bQ8BHK2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3bQ8BHK2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms