Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Atg4dQ8BGV9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Atg4dQ8BGV9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Gm11543-201ENSMUST00000120758 370 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Gm13365-201ENSMUST00000121188 973 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Gm6736-201ENSMUST00000166583 948 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Gm27920-201ENSMUST00000183953 96 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Olfr286-202ENSMUST00000205305 969 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Atg4dQ8BGV9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Gm5479-201ENSMUST00000160578 435 ntBASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Atg4dQ8BGV9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Gm18737-201ENSMUST00000173594 937 ntBASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Gm18889-201ENSMUST00000174284 929 ntBASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.81□□□□□ -0.2
Atg4dQ8BGV9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms