Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Psmb5-202ENSMUST00000227257 622 ntBASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Samm50Q8BGH2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Gm27525-201ENSMUST00000184465 107 ntBASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Samm50Q8BGH2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.41■□□□□ 0.38
Samm50Q8BGH2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Samm50Q8BGH2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms