Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim6Q8BGE7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Gm23547-201ENSMUST00000158210 271 ntBASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim6Q8BGE7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim6Q8BGE7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trim6Q8BGE7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms