Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm23547-201ENSMUST00000158210 271 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm5264-201ENSMUST00000190584 848 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm43514-201ENSMUST00000198852 424 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rpp38Q80UU2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Gm20553-201ENSMUST00000204205 844 ntBASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp38Q80UU2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Gm8000-201ENSMUST00000188378 592 ntBASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp38Q80UU2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.79□□□□□ -0.04
Rpp38Q80UU2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.79□□□□□ -0.04
Rpp38Q80UU2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Gm17271-201ENSMUST00000165535 355 ntBASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
Rpp38Q80UU2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms