Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm18049-201ENSMUST00000208909 581 ntBASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Gm5779-201ENSMUST00000218467 910 ntBASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubfd1Q78JW9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubfd1Q78JW9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Gm15693-201ENSMUST00000120470 637 ntBASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubfd1Q78JW9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ubfd1Q78JW9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubfd1Q78JW9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms