Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dhx40Q6PE54 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dhx40Q6PE54 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dhx40Q6PE54 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.52■□□□□ 0.23
Dhx40Q6PE54 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dhx40Q6PE54 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Dhx40Q6PE54 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.52■□□□□ 0.23
Dhx40Q6PE54 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Dhx40Q6PE54 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dhx40Q6PE54 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dhx40Q6PE54 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Birc2-201ENSMUST00000054878 378 ntBASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dhx40Q6PE54 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms