Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snrnp40Q6PE01 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Gm8602-201ENSMUST00000184045 607 ntBASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Gm37917-201ENSMUST00000194711 392 ntBASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Snrnp40Q6PE01 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13□□□□□ -0.33
Snrnp40Q6PE01 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13□□□□□ -0.33
Snrnp40Q6PE01 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Snrnp40Q6PE01 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Gm9229-201ENSMUST00000222777 126 ntBASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snrnp40Q6PE01 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snrnp40Q6PE01 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms