Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.17□□□□□ -0.14
CishQ62225 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.17□□□□□ -0.14
CishQ62225 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.17□□□□□ -0.14
CishQ62225 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.17□□□□□ -0.14
CishQ62225 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.17□□□□□ -0.14
CishQ62225 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CishQ62225 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CishQ62225 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CishQ62225 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.17□□□□□ -0.14
CishQ62225 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CishQ62225 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.16□□□□□ -0.14
CishQ62225 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CishQ62225 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CishQ62225 Gm27494-201ENSMUST00000184735 189 ntBASIC14.16□□□□□ -0.14
CishQ62225 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.16□□□□□ -0.14
CishQ62225 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CishQ62225 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CishQ62225 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CishQ62225 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.16□□□□□ -0.14
CishQ62225 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CishQ62225 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.15□□□□□ -0.14
CishQ62225 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.15□□□□□ -0.14
CishQ62225 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.15□□□□□ -0.14
CishQ62225 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CishQ62225 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.15□□□□□ -0.14
CishQ62225 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Mir1895-201ENSMUST00000122615 79 ntBASIC14.15□□□□□ -0.14
CishQ62225 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CishQ62225 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.15□□□□□ -0.14
CishQ62225 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CishQ62225 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CishQ62225 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.14□□□□□ -0.15
CishQ62225 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.14□□□□□ -0.15
CishQ62225 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.14□□□□□ -0.15
CishQ62225 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CishQ62225 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms