Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Irf9Q61179 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Irf9Q61179 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Irf9Q61179 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Irf9Q61179 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Irf9Q61179 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.44■□□□□ 0.54
Irf9Q61179 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Irf9Q61179 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.44■□□□□ 0.54
Irf9Q61179 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Irf9Q61179 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Irf9Q61179 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Gm14057-201ENSMUST00000120631 482 ntBASIC18.43■□□□□ 0.54
Irf9Q61179 Gm9726-201ENSMUST00000180321 678 ntBASIC18.43■□□□□ 0.54
Irf9Q61179 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Irf9Q61179 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Irf9Q61179 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Irf9Q61179 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Irf9Q61179 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Irf9Q61179 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.42■□□□□ 0.54
Irf9Q61179 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Irf9Q61179 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.41■□□□□ 0.54
Irf9Q61179 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.41■□□□□ 0.54
Irf9Q61179 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
Irf9Q61179 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Irf9Q61179 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Irf9Q61179 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Gm17837-201ENSMUST00000186435 985 ntBASIC18.41■□□□□ 0.54
Irf9Q61179 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.41■□□□□ 0.54
Irf9Q61179 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Irf9Q61179 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Irf9Q61179 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.41■□□□□ 0.54
Irf9Q61179 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Irf9Q61179 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.4■□□□□ 0.54
Irf9Q61179 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Irf9Q61179 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.4■□□□□ 0.54
Irf9Q61179 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.4■□□□□ 0.54
Irf9Q61179 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.4■□□□□ 0.54
Irf9Q61179 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.4■□□□□ 0.54
Irf9Q61179 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Gm6888-201ENSMUST00000221983 706 ntBASIC18.4■□□□□ 0.54
Irf9Q61179 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.4■□□□□ 0.54
Irf9Q61179 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf9Q61179 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.54
Irf9Q61179 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.39■□□□□ 0.54
Irf9Q61179 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
Irf9Q61179 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Irf9Q61179 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Irf9Q61179 Gm25144-201ENSMUST00000179561 110 ntBASIC18.39■□□□□ 0.53
Irf9Q61179 Gm25352-201ENSMUST00000179815 110 ntBASIC18.39■□□□□ 0.53
Irf9Q61179 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Irf9Q61179 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms