Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Gm16026-204ENSMUST00000162652 683 ntBASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Mir3113-201ENSMUST00000175478 76 ntBASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp13a4Q5XF90 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Mir8117-201ENSMUST00000184773 107 ntBASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Gm5264-201ENSMUST00000190584 848 ntBASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Gm43514-201ENSMUST00000198852 424 ntBASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Gm10175-201ENSMUST00000086013 645 ntBASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atp13a4Q5XF90 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atp13a4Q5XF90 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atp13a4Q5XF90 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms