Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav2Q5R1I9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Gm43125-201ENSMUST00000201724 730 ntBASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.86□□□□□ -0.51
Trav2Q5R1I9 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Celf4-206ENSMUST00000224553 1729 ntBASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Trav2Q5R1I9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav2Q5R1I9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms