Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-1Q5R1I8 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Gm11421-201ENSMUST00000122124 294 ntBASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3-1Q5R1I8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Gm44981-201ENSMUST00000205549 1943 ntBASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Gm7160-202ENSMUST00000188519 1027 ntBASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Gm7417-201ENSMUST00000192950 473 ntBASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-1Q5R1I8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Gm30437-201ENSMUST00000206086 1201 ntBASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms