Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-2Q5R1I3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-2Q5R1I3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav7-2Q5R1I3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Trav7-2Q5R1I3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav7-2Q5R1I3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav7-2Q5R1I3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav7-2Q5R1I3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Gm11780-201ENSMUST00000136880 516 ntBASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Gm6376-201ENSMUST00000209407 580 ntBASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7-2Q5R1I3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms