Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Gm27300-201ENSMUST00000184085 97 ntBASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Gm27335-201ENSMUST00000184758 97 ntBASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trdv4Q5R1A3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Gm18733-201ENSMUST00000173950 856 ntBASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trdv4Q5R1A3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trdv4Q5R1A3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms