Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Bbof1Q3V079 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Gm14140-201ENSMUST00000119999 995 ntBASIC16.32■□□□□ 0.2
Bbof1Q3V079 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Gm8318-201ENSMUST00000182954 872 ntBASIC16.32■□□□□ 0.2
Bbof1Q3V079 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.32■□□□□ 0.2
Bbof1Q3V079 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.32■□□□□ 0.2
Bbof1Q3V079 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Bbof1Q3V079 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.31■□□□□ 0.2
Bbof1Q3V079 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.31■□□□□ 0.2
Bbof1Q3V079 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.31■□□□□ 0.2
Bbof1Q3V079 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Bbof1Q3V079 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.3■□□□□ 0.2
Bbof1Q3V079 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.3■□□□□ 0.2
Bbof1Q3V079 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Bbof1Q3V079 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms