Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SfswapQ3USH5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SfswapQ3USH5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SfswapQ3USH5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
SfswapQ3USH5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SfswapQ3USH5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SfswapQ3USH5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SfswapQ3USH5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SfswapQ3USH5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SfswapQ3USH5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Gm38294-201ENSMUST00000192831 381 ntBASIC17.69■□□□□ 0.42
SfswapQ3USH5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.69■□□□□ 0.42
SfswapQ3USH5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.69■□□□□ 0.42
SfswapQ3USH5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SfswapQ3USH5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SfswapQ3USH5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Gm27622-201ENSMUST00000183779 60 ntBASIC17.68■□□□□ 0.42
SfswapQ3USH5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.68■□□□□ 0.42
SfswapQ3USH5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.68■□□□□ 0.42
SfswapQ3USH5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.68■□□□□ 0.42
SfswapQ3USH5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Gm13015-201ENSMUST00000118674 204 ntBASIC17.67■□□□□ 0.42
SfswapQ3USH5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Gm7063-201ENSMUST00000186840 981 ntBASIC17.67■□□□□ 0.42
SfswapQ3USH5 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.67■□□□□ 0.42
SfswapQ3USH5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SfswapQ3USH5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SfswapQ3USH5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SfswapQ3USH5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.66■□□□□ 0.42
SfswapQ3USH5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SfswapQ3USH5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SfswapQ3USH5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SfswapQ3USH5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SfswapQ3USH5 Gm8410-201ENSMUST00000117225 605 ntBASIC17.66■□□□□ 0.42
SfswapQ3USH5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.66■□□□□ 0.42
SfswapQ3USH5 Gm27618-201ENSMUST00000183671 60 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms