Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.46■□□□□ 0.39
Limch1Q3UH68 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.46■□□□□ 0.39
Limch1Q3UH68 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.46■□□□□ 0.39
Limch1Q3UH68 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Limch1Q3UH68 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Limch1Q3UH68 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.45■□□□□ 0.38
Limch1Q3UH68 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Gm7063-201ENSMUST00000186840 981 ntBASIC17.45■□□□□ 0.38
Limch1Q3UH68 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.45■□□□□ 0.38
Limch1Q3UH68 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Limch1Q3UH68 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Gm14701-201ENSMUST00000117156 348 ntBASIC17.44■□□□□ 0.38
Limch1Q3UH68 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.44■□□□□ 0.38
Limch1Q3UH68 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.44■□□□□ 0.38
Limch1Q3UH68 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.44■□□□□ 0.38
Limch1Q3UH68 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Limch1Q3UH68 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Limch1Q3UH68 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Limch1Q3UH68 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.43■□□□□ 0.38
Limch1Q3UH68 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Gm44492-201ENSMUST00000197012 141 ntBASIC17.43■□□□□ 0.38
Limch1Q3UH68 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.43■□□□□ 0.38
Limch1Q3UH68 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.43■□□□□ 0.38
Limch1Q3UH68 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Limch1Q3UH68 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms